Resources

Everything in one place: every method with paper and code links, plus the datasets, benchmarks and frameworks that matter for world modeling — and for a world model of the cell.

Foundations

Core Architectures

MethodTypeYearPaperCode
I-JEPAImage2023papercode
V-JEPAVideo2025papercode
MC-JEPAVideoImage2023paper
V-JEPA 2.1Video2026papercode

Theory & Analysis

World Models, Robotics & Planning

Biology & Drug Discovery

MethodTypeYearPaperCode
BioJEPA-ACBiologyAction2026code
Cell-JEPABiology2026paper
JEPA-DNABiology2026paper
ProteinJEPABiology2026paper

Graphs & Molecules

MethodTypeYearPaperCode
Graph-JEPAGraph2023paper
Polymer-JEPAMolecule2025papercode

Medical Imaging & Biosignals

MethodTypeYearPaperCode
S-JEPA (Signal-JEPA)Biosignal2024paper
Brain-JEPABiosignal2024paper
JEPA for ECG ClassificationBiosignal2024paper
From Video to EEG: Adapting JEPA to Brain SignalsBiosignal2025paper
Multimodal JEPA for Imaging and Clinical SignaturesMedImaging2025paper
RadJEPAMedImaging2026paper
EchoJEPAMedImaging2026paper
US-JEPAMedImaging2026paper

Audio & Speech

MethodTypeYearPaperCode
A-JEPAAudio2023paper
Design Choices in JEPA for General AudioAudio2024paper
Stem-JEPAAudio2024paper
Audio-JEPAAudio2025paper
WavJEPAAudio2025paper
JEP-KDAudio2024paper

3D & Point Clouds

MethodTypeYearPaperCode
Point-JEPA3D2024paper
3D-JEPA3D2024paper
CrossJEPA3D2025paper

Time Series & Tabular

MethodTypeYearPaperCode
LaT-PFNTimeSeries2024paper
T-JEPA (Trajectory Similarity)TimeSeries2024paper
T-JEPA (Tabular)Tabular2024paper
Joint Embeddings Go TemporalTimeSeries2025paper
Koopman Invariants in JEPAsTimeSeriesTheory2025paper
MTS-JEPATimeSeries2026paper
Giving Sensors a Voice: Multimodal JEPA for Time SeriesTimeSeries2026paper

Earth Observation

MethodTypeYearPaperCode
Predicting Gradient is Better: SSL for SAR ATR with a JEPARemoteSensing2023paper
AnySatRemoteSensing2024paper
REJEPARemoteSensing2025paper
X-JEPARemoteSensing2026paper

Language & Multimodal

MethodTypeYearPaperCode
TI-JEPALanguage2025paper
LLM-JEPALanguage2025paper
JEPA4RecLanguage2025paper

Generative Modeling

MethodTypeYearPaperCode
D-JEPA (Denoising with JEPA)Generative2024paper
Improving JEPA with Diffusion NoiseGenerative2025paper
JEPA-TGenerative2025paper

Datasets & Benchmarks

ResourceUseLink
scPerturbHarmonized single-cell perturbation datasets (genetic + chemical) for action-conditioned cell world modelssanderlab.org/scPerturb
CMap / L1000~1.5M expression profiles across ~5,000 compounds and ~3,000 genetic reagentsclue.io
DepMapCancer Dependency Map — gene essentiality across 2,000+ modelsdepmap.org
DROIDLarge in-the-wild robot manipulation dataset for JEPA world-model planningdroid-dataset
KineticsHuman-action video used to pretrain V-JEPApaper
IntPhys 2 / MVPBench / CausalVQAPhysical-understanding benchmarks for video world modelsIntPhys2

Code & Frameworks

RepoWhat
facebookresearch/ijepaOfficial I-JEPA
facebookresearch/jepaOfficial V-JEPA
facebookresearch/vjepa2V-JEPA 2 / 2.1
facebookresearch/eb_jepaLightweight EB-JEPA library
galilai-group/lejepaLeJEPA + SIGReg
galilai-group/stable-worldmodelReproducible world-model research stack
GPTomics/biojepaAction-conditioned cell world model
AbdelStark/awesome-jepaCurated JEPA resource index (CC0)